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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906679.1_cds_XP_016456842.1_50638
CDS Infomation

[gene=LOC107780773] [db_xref=GeneID:107780773] [protein=protein kinase APK1A, chloroplastic-like] [protein_id=XP_016456842.1] [location=join(44051..44102,44616..44932,45093..45228,45320..45462,45560..45683,46175..46617)] [gbkey=CDS]
Sequence

ATGGGGATTTGTTTGAGTGCTAGAATTAAAGCTGAAAGCCCATTTCATACAGGGCTAAAT
TCAAGATCTGCTAGTACAGATGGATATGATAGCAATCCAAGCTCGAGGGTCTCAACCGTG
CCACTGGCTCCAAGAAGTGAAGGAGAGATACTGCAGTCTGCCAATTTGAAGAGCTTTAGT
TTCTCTGATCTCAAAACGGCCACTAGGAATTTTCGTCCCGATAGTGTACTGGGAGAAGGT
GGATTTGGCTCGGTTTTCAAAGGGTGGATCGACGAGAACACGTTTGCAGCTACCAAGCCC
GGGACAGGTGTGATCATTGCTGTGAAAAGGCTAAATCAAGAAGGTTTTCAAGGTCACAGG
GAATGGCTGGCAGAAGTAAACTATTTGGGACAGTTTTCTCATCCTCATCTCGTAAAGTTG
ATCGGGTATTGCTTGGAGGATGAACACCGGCTTTTGGTTTATGAGTTCATGCCTCGGGGC
AGCTTGGAAAACCATTTGTTCAGAAGAGGTTCTTATTTCCAGCCTCTATCTTGGAACCTG
CGATTGAAGGTTGCTCTTGGAGCTGCAAAGGGGCTTGCTTTTCTCCATAGTGCTGAAACA
AAAGTGATATATCGAGACTTCAAGACCTCGAATATTTTGCTTGATTCAAATTACACTGCC
AAGCTCTCAGACTTTGGATTGGCAAAGGATGGACCGACAGGTGATAAAAGCCACGTCTCT
ACAAGGGTTATGGGGACCTATGGATATGCAGCTCCAGAATACATGGCAACTGGTCATTTA
ACTAGCAAGAGTGATGTGTATAGTTTTGGAGTTGTCCTCCTCGAAATGCTGTCTGGTCGT
AGGGCAATCGACAAGAATAGACCATCTGGAGAACATAACCTAGTGGAGTGGGCTAAACCT
TACCTAGGCAACAAACGTAAGGTCTTCCGTGTTCTGGATACCCGTCTTGAAGGCCAGTAT
TCAATGGACGTGGCGAGTAAAGTAGCTAACCTTGCATTGCGGTGCCTATCCAAAGATCCT
CGGTTTAGATCAAGCATGAGTGACATTGTTAAAGAACTAGAGCAACTTTATCAACAATCT
AAAGATGCAGGTAATACTCGCAGCCACGGTAACAACCGGCCTAGACCACGTAGACGGAGT
GCTGGTGATGTTGGTAATAAACATGCTTCAGTTGCTTATCCAAGACCTTCTGCTTCACCC
CTTTATGCTAAATAA

Peptide Sequence

PEP ID

XP_016456842.1
PEP Infomation

PREDICTED: protein kinase APK1A, chloroplastic-like [Nicotiana tabacum]
Sequence

MGICLSARIKAESPFHTGLNSRSASTDGYDSNPSSRVSTVPLAPRSEGEILQSANLKSFS
FSDLKTATRNFRPDSVLGEGGFGSVFKGWIDENTFAATKPGTGVIIAVKRLNQEGFQGHR
EWLAEVNYLGQFSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNL
RLKVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYTAKLSDFGLAKDGPTGDKSHVS
TRVMGTYGYAAPEYMATGHLTSKSDVYSFGVVLLEMLSGRRAIDKNRPSGEHNLVEWAKP
YLGNKRKVFRVLDTRLEGQYSMDVASKVANLALRCLSKDPRFRSSMSDIVKELEQLYQQS
KDAGNTRSHGNNRPRPRRRSAGDVGNKHASVAYPRPSASPLYAK

Transcript Sequence

Gene sequence data has not been registered.